BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F05SP1|AL428581
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig436 1477 0.0
>3x_Contig436
Length = 1820
Score = 1477 bits (744), Expect = 0.0
Identities = 745/746 (99%)
Strand = Plus / Plus
Query: 1 atcgtcatatttagttccggggaattgtgggccagctggggaggaattttgacctggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 atcgtcatatttagttccggggaattgtgggccagctggggaggaattttgacctggatc 1134
Query: 61 atggttgccactctgcggatttggtgatgggccagtacctctgaatggatcataaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 atggttgccactctgcggatttggtgatgggccagtacctctgaatggatcataaatcat 1194
Query: 121 accgccttgctgattagtactatttctattcagtggatcaaaatcctgtgggaaccgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 accgccttgctgattagtactatttctattcagtggatcaaaatcctgtgggaaccgcag 1254
Query: 181 cccattagggtacaaatcgttatcaccatatccacttactggtagccctaaacctggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 cccattagggtacaaatcgttatcaccatatccacttactggtagccctaaacctggaac 1314
Query: 241 gccaaactccccagaacttggaatgcctggtcctgtttgtatctcatactcgtcatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gccaaactccccagaacttggaatgcctggtcctgtttgtatctcatactcgtcatcaaa 1374
Query: 301 accaggaatctgaggattccttggtggttggttagctaccatcctttcaaccctttcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 accaggaatctgaggattccttggtggttggttagctaccatcctttcaaccctttcctt 1434
Query: 361 gaaaatatcatctttatcttttgattgcaattcatcaattcttggcgatcgavatggtct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1435 gaaaatatcatctttatcttttgattgcaattcatcaattcttggcgatcgagatggtct 1494
Query: 421 ttcccgtagtgcagatccactcagacctgcaaaaagtttaaacttggtctgaattatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 ttcccgtagtgcagatccactcagacctgcaaaaagtttaaacttggtctgaattatttt 1554
Query: 481 gaaaacctcgtcagtataaagtgagttaatctctgattccgatattggaaagctcaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 gaaaacctcgtcagtataaagtgagttaatctctgattccgatattggaaagctcaaaga 1614
Query: 541 tggttgctccccaaataacgtagaatactggaaaataccttgaaccaaactatcatcatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 tggttgctccccaaataacgtagaatactggaaaataccttgaaccaaactatcatcatc 1674
Query: 601 actgcaaatgttcaccatacacttttccgaattacccatttccaatgcaacaacctctag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 actgcaaatgttcaccatacacttttccgaattacccatttccaatgcaacaacctctag 1734
Query: 661 atcacttagatgctttttgaaaactttactggcagtttctggttcgacaacaatgacaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 atcacttagatgctttttgaaaactttactggcagtttctggttcgacaacaatgacaac 1794
Query: 721 tgtagcgcttttagctgaattattct 746
||||||||||||||||||||||||||
Sbjct: 1795 tgtagcgcttttagctgaattattct 1820
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6344
Number of Sequences: 1807
Number of extensions: 6344
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)